Overview

The Epigenomics Core Facility of Weill Cornell Medicine provides an array of epigenomics and bioinformatics research resources and services that include:

  • DNA methylation profiling [More]
  • Protein-nucleic acid association [More]
  • Single Cell Transcriptomics, Immune Profiling and Epigenomics [More]
  • Spatial Transcriptomics [More]
  • Bioinformatics analysis [More]
Core resources and services include sample preparation services and data generation on the Illumina NovaSeq 6000 and MiSeq platforms.

Getting Started Request Services Pubshare FAQ Pricelist

Recent Publications

We require that core clients acknowledge the Epigenomics Core of Weill Cornell Medical College in publications and presentions enabled by our resources.

  • Fiore, D. et al. Cell Rep Med. 2025 Mar 24:102029. [PubMed]
  • Nauseef, JT. et al. NPJ Precis Oncol. 2025 Mar 28;9(1):91. [PubMed]
  • Wada, S. et al. J Orthop Res. 2025. Mar 10;EPub [PubMed]
  • Chaudhary, V. et al. J Exp Med. 2025. Mar 3;222(3):e20240852. [PubMed]
  • Lucotti, S. et. al. Cell. 2025. Feb 11:S0092-8674(25)00094-7. [PubMed]
  • Sethna, Z. et al. Nature. 2025. Feb 19. [PubMed]
  • Barton, BM. et. al. Nat Immunol. 2025. Feb;26(2):200-214. [PubMed]
  • Joseph, AM. et al. Mucosal Immunol. 2024. Dec;17(6):1212-1221. [PubMed]
  • Cortada, E. et al. Commun Biol. 2024. Dec 3;7(1):1611. [PubMed]
  • Kaneko, K. et al. JCI Insight. 2024. Nov 22;9(22):e178977. [PubMed]
  • Forbes, AN. et. al. Cell Syst. 2024. Sep 18;15(9):824-837.e6. [PubMed]
  • Bojmar, L. et. al. Nat Med. 2024. Aug;30(8):2170-2180. [PubMed]
  • Kinoshita, H. et. al. Dev Cell. 2024. Aug 5;59(15):1972-1987. [PubMed]
  • Ahmed, A. et al. Nature. 2024 Jun;630(8018):976-983. [PubMed]
  • Arifuzzaman, M. et al. J Exp Med. 2024. May 6;221(5):e20232148. [PubMed]
  • Li, J. et al. Nat Commun. 2024. Apr 3;15(1):2879. [PubMed]
  • Pakula, H. et al. Nat Commun. 2024. Jan 8;15(1):363 [PubMed]
  • Franceschini, GM. et al. Cancer Discov. 2024. Jan 10: Epub. [PubMed]

Comprehensive List of Epigenomics Core Publications via Pubmed

News

Jan 2025: The Epigenomics Core facility is hiring a Research Specialist! Please check the Employment Opportunities page for details.

Sep 2024: We have added the new CosMx Human 6K Discovery Panel to the Single-Cell Spatial Imaging (CosMx) services. [Service Details]

Sep 2024: We are now offering Visium HD as part of our Spatial Gene Expression services. [Service Details]

May 2024: We are switching our 10X Genomics Single Cell Transcriptomics and Immune Profiling Protocols to GEM-X (version 3 for Immune Profiling and version 4 for Transcriptomics).

May 2024: Cell Multiplexing via CMOs (cellplex) for 10X Genomics Single Cell Transcriptomics are not compatible with GEM-X. If you have an ongoing project with CMOs, please discuss with the core before submitting your next service request.